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Plant and Animal Genomics

The aims of the Plant and Animal Genomics Program are to understand the genome organization, variability and evolution of different crops and domestic animals and to elucidate the genetics of important traits of species of agricultural interest.

To this end we are using a panoply of genetics, genomics and bioinformatic approaches which we apply to a wide array of plant and animal species, including cucurbits and different Rosaceae species, as well as pigs and goats. The Program also works in developing new bioinformatics methods and software tools to analyze the data generated by different NGS approaches.

The final objectives of the Program are to improve our knowledge on the structure and evolution of complex genomes as well as to develop methodological approaches that can be applied to commercial breeding programs through contracts with companies or agreements with public organizations.

Pages

Publications

López-Girona E., Zhang Y., Eduardo I., Mora J.R.H., Alexiou K.G., Arús P., Aranzana M.J.
(2017) Scientific Reports, vol. 7 (1), Art. number 6714
Eusebi P.G., González-Prendes R., Quintanilla R., Tibau J., Cardoso T.F., Clop A., Amills M.
(2017) Animal Genetics, vol. 48 (4), pp. 466-469
Leno-Colorado J., Hudson N.J., Reverter A., Pérez-Enciso M.
(2017) G3: Genes, Genomes, Genetics, vol. 7 (7), pp. 2171-2184
Rodriguez-Cortes A., Martori C., Martinez-Florez A., Clop A., Amills M., Kubejko J., Llull J., Nadal J.M., Alberola J.
(2017) Scientific Reports, vol. 7 (1), Art. number 3346
Martínez-Montes A.M., Muiños-Bühl A., Fernández A., Folch J.M., Ibáñez-Escriche N., Fernández A.I.
(2017) Mammalian Genome, vol. 28 (3-4), pp. 130-142
Verma S., Bassil N.V., Van De Weg E., Harrison R.J., Monfort A., Hidalgo J.M., Amaya I., Denoyes B., Mahoney L.L., Davis T.M., Fan Z., Knapp S., Whitaker V.M.
(2017) Acta Horticulturae, vol. 1156, pp. 75-81
Ríos P., Argyris J., Vegas J., Leida C., Kenigswald M., Tzuri G., Troadec C., Bendahmane A., Katzir N., Picó B., Monforte A.J., Garcia-Mas J.
(2017) Plant Journal, vol. 91 (4), pp. 671-683
Twardowski T., Aguilar A., Puigdomenech P., Linkiewicz A., Sowa S., Zimny T.
(2017) Biotechnologia, vol. 98 (1), pp. 73-78
Pérez-Enciso M., Forneris N., de los Campos G., Legarra A.
(2017) Genetics, vol. 205 (2), pp. 939-953
Serra O., Giné-Bordonaba J., Eduardo I., Bonany J., Echeverria G., Larrigaudière C., Arús P.
(2017) Tree Genetics and Genomes, vol. 13 (4), Art. number 77
Biscarini F., Nazzicari N., Bink M., Arús P., Aranzana M.J., Verde I., Micali S., Pascal T., Quilot-Turion B., Lambert P., da Silva Linge C., Pacheco I., Bassi D., Stella A., Rossini L.
(2017) BMC Genomics, vol. 18 (1), Art. number 432
Denoyes B., Amaya I., Liston A., Tennessen J., Ashman T.-L., Whitaker V.M., Hytönen T., Van De Weg E., Osorio S., Folta K.M., Slovin J., Harrison R.J., Monfort A., Bassil N.V.
(2017) Acta Horticulturae, vol. 1156, pp. 13-24
Vicient C.M., Casacuberta J.M.
(2017) Annals of Botany, vol. 120 (2), pp. 195-207
Navarro J., Vera G., Ramos-Onsins S., Hernández P.
(2017) Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), vol. 10104 LNCS, pp. 457-467
Hernández Mora J.R., Micheletti D., Bink M., Van de Weg E., Cantín C., Nazzicari N., Caprera A., Dettori M.T., Micali S., Banchi E., Campoy J.A., Dirlewanger E., Lambert P., Pascal T., Troggio M., Bassi D., Rossini L., Verde I., Quilot-Turion B., Laurens F., Arús P., Aranzana M.J.
(2017) BMC Genomics, vol. 18 (1), Art. number 404
Ballester M., Ramayo-Caldas Y., Revilla M., Corominas J., Castelló A., Estellé J., Fernández A.I., Folch J.M.
(2017) Scientific Reports, vol. 7, Art. number 46539
González-Prendes R., Quintanilla R., Cánovas A., Manunza A., Cardoso T.F., Jordana J., Noguera J.L., Pena R.N., Amills M.
(2017) Scientific Reports, vol. 7, Art. number 39830
Bretó M.P., Cantín C.M., Iglesias I., Arús P., Eduardo I.
(2017) Euphytica, vol. 213 (1), Art. number 14
Kubejko J., Clop A., Balatsky V., Pochernyaev K., Eghbalsaied S., Amills M.
(2017) Animal Genetics (Article in Press)
Pereira L., Pujol M., Garcia-Mas J., Phillips M.A.
(2017) Plant Journal (Article in Press)
Díaz A., Martín-Hernández A.M., Dolcet-Sanjuan R., Garcés-Claver A., Álvarez J.M., Garcia-Mas J., Picó B., Monforte A.J.
(2017) Theoretical and Applied Genetics, vol. 130 (9), pp. 1837-1856
Cardoso T.F., Cánovas A., Canela-Xandri O., González-Prendes R., Amills M., Quintanilla R.
(2017) Scientific Reports, vol. 7, Art. number 40005
Pérez-Enciso M., De Los Campos G., Hudson N., Kijas J., Reverter A.
(2017) Heredity, vol. 118 (2), pp. 160-168
Vicient C.M.
(2017) BMC Research Notes, vol. 10 (1), Art. number 323
López-Ribera I., Vicient C.M.
(2017) Plant Methods, vol. 13 (1), Art. number 31
Martínez-Montes A.M., Fernández A., Pérez-Montarelo D., Alves E., Benítez R.M., Nuñez Y., Óvilo C., Ibañez-Escriche N., Folch J.M., Fernández A.I.
(2017) Animal Genetics, vol. 48 (2), pp. 151-165
Meneses C., Ulloa-Zepeda L., Cifuentes-Esquivel A., Infante R., Cantin C.M., Batlle I., Arús P., Eduardo I.
(2016) Molecular Breeding, vol. 36 (6), Art. number 77
Manunza A., Noce A., Serradilla J.M., Goyache F., Martínez A., Capote J., Delgado J.V., Jordana J., Muñoz E., Molina A., Landi V., Pons A., Balteanu V., Traoré A., Vidilla M., Sánchez-Rodríguez M., Sànchez A., Cardoso T.F., Amills M.
(2016) Genetics Selection Evolution, vol. 48 (1), Art. number 52
Chański W., González-Prendes R., Castelló A., Jordana J., Manunza A., Quintanilla R., Amills M.
(2016) Livestock Science, vol. 190, pp. 27-30

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